BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E11LP1|AL425556
(985 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1469 1906 0.0
>3x_Contig1469
Length = 9240
Score = 1906 bits (959), Expect = 0.0
Identities = 973/979 (99%), Gaps = 1/979 (0%)
Strand = Plus / Plus
Query: 1 aaaatttgacgtcaagaccgggttcaagttcgactccgaccactcctcaggtgtatagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aaaatttgacgtcaagaccgggttcaagttcgactccgaccactcctcaggtgtatagac 752
Query: 61 gttccaagactgtcaattccaaaactagtcgctctgaggaaaactccaaggtgcggactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gttccaagactgtcaattccaaaactagtcgctctgaggaaaactccaaggtgcggactt 812
Query: 121 cacaggtacgatccggttgggaccgtcctttttcgtcgcgacasc-atcaccttcacctt 179
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 813 cacaggtacgatccggttgggaccgtcctttttcgtcgcgacagccatcaccttcacctt 872
Query: 180 cacctgccgcttctggatcgcaatatcaaaagcagaaaagctacactaaccggaaaagta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 cacctgccgcttctggatcgcaatatcaaaagcagaaaagctacactaaccggaaaagta 932
Query: 240 gtacttcgcatactgagatgttgaaatctctatacgttggtgatagcaaggtttcatcac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 gtacttcgcatactgagatgttgaaatctctatacgttggtgatagcaaggtttcatcac 992
Query: 300 cgccacaatcgaatatcgataaagctcctcagaggaaacccttggaaagaacagggttat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 cgccacaatcgaatatcgataaagctcctcagaggaaacccttggaaagaacagggttat 1052
Query: 360 cgaagcgtgttgtcgaagatgaagtgctgagaagacaacagtccagtttgtcttcatcgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 cgaagcgtgttgtcgaagatgaagtgctgagaagacaacagtccagtttgtcttcatcgg 1112
Query: 420 gacgtatacacaagcacatagagtctccatttcagagaaattccaaaccggttagcaaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gacgtatacacaagcacatagagtctccatttcagagaaattccaaaccggttagcaaga 1172
Query: 480 gcattgttaaggcaccgaacaaagtcaattttgcatttgamactagtttgaacgatatag 539
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1173 gcattgttaaggcaccgaacaaagtcaattttgcatttgaaactagtttgaacgatatag 1232
Query: 540 acctgaacctattgacacgcgcaagagcatcgtctggtggtactcccacatcgaaggggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 acctgaacctattgacacgcgcaagagcatcgtctggtggtactcccacatcgaaggggt 1292
Query: 600 cagcagcggttcctgccgctccgaaaactaaaaataagacggactctcaagtaagttaga 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1293 cagcagcggttcctgccgctccgaaaactaaaaataagacggactctcaagtaagtaaga 1352
Query: 660 tagccaatgagatacaaaattctaataaatcccgaatctctaaggcaaatagtcccattc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 tagccaatgagatacaaaattctaataaatcccgaatctctaaggcaaatagtcccattc 1412
Query: 720 aaagaacaactactactacatctaacattccgagcgaggctaaagagttatacaacatgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 aaagaacaactactactacatctaacattccgagcgaggctaaagagttatacaacatgc 1472
Query: 780 tctcatcgcgattgaagagaagaaatgttttattcgacaagaaaggtacaatcaattctg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 tctcatcgcgattgaagagaagaaatgttttattcgacaagaaaggtacaatcaattctg 1532
Query: 840 aaaacaatgacaaaactggcgcatcagtwaaagtggaatcttcacatgtcgaaattatag 899
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1533 aaaacaatgacaaaactggcgcatcagtaaaagtggaatcttcacatgtcgaaattatag 1592
Query: 900 gttcaaagcgtgatcacacgcatacaagttttatggagctaccatctatgcmagccacta 959
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1593 gttcaaagcgtgatcacacgcatacaagttttatggagctaccatctatgcaagccacta 1652
Query: 960 ttgcggatttagcaaagac 978
|||||||||||||||||||
Sbjct: 1653 ttgcggatttagcaaagac 1671
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5896
Number of Sequences: 1807
Number of extensions: 5896
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 985
length of database: 10,358,551
effective HSP length: 16
effective length of query: 969
effective length of database: 10,329,639
effective search space: 10009420191
effective search space used: 10009420191
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)